Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Primary Metabolic Process (GO:0044238) Genes Targeted by hsa-mir-1305 in MM Myeloma Zhan Cluster 10 Table contains all genes in the MM Myeloma Zhan cluster number 10. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1305 GO:0044238 6908 TBP TATA box binding protein [Source:HGNC Symbol;Acc:11588] zzz999 Yes 3020 H3F3B H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765] zzz999 7336 UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 [Source:HGNC Symbol;Acc:12495] P T Yes 8894 EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa [Source:HGNC Symbol;Acc:3266] T Yes 6342 SCP2 sterol carrier protein 2 [Source:HGNC Symbol;Acc:10606] zzz999 Yes 7514 XPO1 exportin 1 (CRM1 homolog, yeast) [Source:HGNC Symbol;Acc:12825] P T Yes 1604 CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) [Source:HGNC Symbol;Acc:2665] T Yes 6844 VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) [Source:HGNC Symbol;Acc:12643] zzz999 5019 OXCT1 3-oxoacid CoA transferase 1 [Source:HGNC Symbol;Acc:8527] T Yes 5781 PTPN11 protein tyrosine phosphatase, non-receptor type 11 [Source:HGNC Symbol;Acc:9644] T Yes 6726 SRP9 signal recognition particle 9kDa [Source:HGNC Symbol;Acc:11304] T Yes 10989 IMMT inner membrane protein, mitochondrial [Source:HGNC Symbol;Acc:6047] zzz999 7531 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] zzz999 5706 PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Source:HGNC Symbol;Acc:9553] zzz999 Yes 8661 EIF3A eukaryotic translation initiation factor 3, subunit A [Source:HGNC Symbol;Acc:3271] zzz999 Yes 6427 SRSF2 serine/arginine-rich splicing factor 2 [Source:HGNC Symbol;Acc:10783] T Yes 5431 POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa [Source:HGNC Symbol;Acc:9188] zzz999 Yes 4899 NRF1 nuclear respiratory factor 1 [Source:HGNC Symbol;Acc:7996] zzz999 Yes 201254 STRA13 stimulated by retinoic acid 13 homolog (mouse) [Source:HGNC Symbol;Acc:11422] zzz999 Yes 9689 BZW1 basic leucine zipper and W2 domains 1 [Source:HGNC Symbol;Acc:18380] T Yes 5378 PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:9121] T Yes 2634 GBP2 guanylate binding protein 2, interferon-inducible [Source:HGNC Symbol;Acc:4183] zzz999 80308 FLAD1 FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24671] zzz999 Yes 6121 RPE65 retinal pigment epithelium-specific protein 65kDa [Source:HGNC Symbol;Acc:10294] zzz999 Yes 1984 EIF5A eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:3300] zzz999 Yes 9777 TM9SF4 transmembrane 9 superfamily protein member 4 [Source:HGNC Symbol;Acc:30797] zzz999 9972 NUP153 nucleoporin 153kDa [Source:HGNC Symbol;Acc:8062] P T Yes 4677 NARS asparaginyl-tRNA synthetase [Source:HGNC Symbol;Acc:7643] zzz999 Yes 3188 HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') [Source:HGNC Symbol;Acc:5042] T Yes 10130 PDIA6 protein disulfide isomerase family A, member 6 [Source:HGNC Symbol;Acc:30168] T Yes 7343 UBTF upstream binding transcription factor, RNA polymerase I [Source:HGNC Symbol;Acc:12511] T Yes 3662 IRF4 interferon regulatory factor 4 [Source:HGNC Symbol;Acc:6119] T Yes 9188 DDX21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Source:HGNC Symbol;Acc:2744] T 4719 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7707] T Yes 3908 LAMA2 laminin, alpha 2 [Source:HGNC Symbol;Acc:6482] zzz999 8772 FADD Fas (TNFRSF6)-associated via death domain [Source:HGNC Symbol;Acc:3573] zzz999 9801 MRPL19 mitochondrial ribosomal protein L19 [Source:HGNC Symbol;Acc:14052] T Yes 1470 CST2 cystatin SA [Source:HGNC Symbol;Acc:2474] zzz999 7247 TSN translin [Source:HGNC Symbol;Acc:12379] T Yes 7174 TPP2 tripeptidyl peptidase II [Source:HGNC Symbol;Acc:12016] zzz999 Yes 8886 DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741] T 7347 UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:HGNC Symbol;Acc:12515] zzz999 Yes 11222 MRPL3 mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:10379] zzz999 Yes 6637 SNRPG small nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:11163] zzz999 Yes 5321 PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) [Source:HGNC Symbol;Acc:9035] zzz999 Yes 3190 HNRNPK heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:5044] zzz999 Yes 9774 BCLAF1 BCL2-associated transcription factor 1 [Source:HGNC Symbol;Acc:16863] P T Yes 6434 TRA2B transformer 2 beta homolog (Drosophila) [Source:HGNC Symbol;Acc:10781] P T Yes 6894 TARBP1 TAR (HIV-1) RNA binding protein 1 [Source:HGNC Symbol;Acc:11568] zzz999 Yes 6059 ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 [Source:HGNC Symbol;Acc:69] P T Yes 10987 COPS5 COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) [Source:HGNC Symbol;Acc:2240] zzz999 Yes 6259 RYK RYK receptor-like tyrosine kinase [Source:HGNC Symbol;Acc:10481] T Yes 3376 IARS isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:5330] zzz999 Yes 8548 BLZF1 basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:1065] zzz999 Yes 488 ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 [Source:HGNC Symbol;Acc:812] zzz999 Yes 5825 ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 [Source:HGNC Symbol;Acc:67] T 3703 STT3A STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:6172] zzz999 Yes 11103 KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:HGNC Symbol;Acc:5176] T Yes 5756 TWF1 twinfilin, actin-binding protein, homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:9620] zzz999 Yes 8881 CDC16 cell division cycle 16 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:1720] zzz999 Yes 10247 HRSP12 heat-responsive protein 12 [Source:HGNC Symbol;Acc:16897] zzz999 Yes 1967 EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa [Source:HGNC Symbol;Acc:3257] zzz999 Yes 23190 UBXN4 UBX domain protein 4 [Source:HGNC Symbol;Acc:14860] T 2926 GRSF1 G-rich RNA sequence binding factor 1 [Source:HGNC Symbol;Acc:4610] T Yes 1054 CEBPG CCAAT/enhancer binding protein (C/EBP), gamma [Source:HGNC Symbol;Acc:1837] T Yes 10797 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:HGNC Symbol;Acc:7434] zzz999 6606 SMN1 survival of motor neuron 1, telomeric [Source:HGNC Symbol;Acc:11117] T 8502 PKP4 plakophilin 4 [Source:HGNC Symbol;Acc:9026] T 7705 ZNF146 zinc finger protein 146 [Source:HGNC Symbol;Acc:12931] zzz999 Yes 2483 FRG1 FSHD region gene 1 [Source:HGNC Symbol;Acc:3954] zzz999 Yes 6950 TCP1 t-complex 1 [Source:HGNC Symbol;Acc:11655] zzz999 Yes 1312 COMT catechol-O-methyltransferase [Source:HGNC Symbol;Acc:2228] zzz999 Yes 1965 EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa [Source:HGNC Symbol;Acc:3265] T Yes 594 BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide [Source:HGNC Symbol;Acc:987] T Yes 3066 HDAC2 histone deacetylase 2 [Source:HGNC Symbol;Acc:4853] T Yes 5504 PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 [Source:HGNC Symbol;Acc:9288] T Yes 7019 TFAM transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741] T Yes 6629 SNRPB2 small nuclear ribonucleoprotein polypeptide B [Source:HGNC Symbol;Acc:11155] zzz999 Yes 7371 UCK2 uridine-cytidine kinase 2 [Source:HGNC Symbol;Acc:12562] zzz999 Yes 2058 EPRS glutamyl-prolyl-tRNA synthetase [Source:HGNC Symbol;Acc:3418] zzz999 Yes

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